Installation¶
The only requirement is an Anaconda (or Miniconda) installation which supports Python 3.
There are two different ways to install protopipe,
if you just want to use it as it is (Released version),
or if you also want to develop it (Development version).
Note
For both types of installation the use of mamba might provide improved speed during the creation of the conda environment.
In both cases, if you want to perform a full analysis, you will need some computational power in order to produce enough data files for model and performance estimation. This can be accomplished through the use of a GRID environment.
After installing protopipe,
install the code necessary to interface it with the grid (Grid environment),
use protopipe on the grid (Large scale analyses).